thegreataxios.github.io

{
  "name": "describe_study",
  "kind": "answer",
  "impl": "imperative",
  "description": "Report grid size, voxel spacing in mm, intensity range, a suggested bright-region window, and the current view. Call first after a study is loaded (including after the user opens a different file — opening replaces the current study). Histogram runs on-device; voxels stay in-tab.",
  "page": "/faraday/"
}

{
  "name": "find_regions",
  "kind": "answer",
  "impl": "imperative",
  "description": "Find connected 3D regions whose voxel intensity falls inside a window, and measure each one (volume in mL, bounding box in mm, mean intensity, centroid). Returns the largest regions first. Use describe_study to see the intensity range before choosing a window. Voxel data is never returned — only measurements. Safe across file switches: stale results from a previous study are discarded.",
  "inputSchema": {
    "type": "object",
    "properties": {
      "min_intensity": {
        "type": "number",
        "description": "Inclusive lower bound on voxel intensity."
      },
      "max_intensity": {
        "type": "number",
        "description": "Inclusive upper bound on voxel intensity."
      },
      "min_volume_ml": {
        "type": "number",
        "description": "Discard regions smaller than this volume in mL. Defaults to 0.1."
      },
      "limit": {
        "type": "integer",
        "description": "Maximum number of regions to return. Defaults to 5."
      }
    },
    "required": [
      "min_intensity",
      "max_intensity"
    ]
  },
  "page": "/faraday/"
}

{
  "name": "focus_region",
  "kind": "act",
  "impl": "imperative",
  "description": "Move the viewer's crosshair to a region found by find_regions, so the user sees what you are describing. Call find_regions first to get region ids.",
  "inputSchema": {
    "type": "object",
    "properties": {
      "region_id": {
        "type": "integer",
        "description": "Region id from find_regions."
      }
    },
    "required": [
      "region_id"
    ]
  },
  "page": "/faraday/"
}

{
  "name": "set_view",
  "kind": "act",
  "impl": "imperative",
  "description": "Switch the viewer layout. One of: axial, coronal, sagittal, multiplanar, render.",
  "inputSchema": {
    "type": "object",
    "properties": {
      "view": {
        "type": "string",
        "enum": [
          "axial",
          "coronal",
          "sagittal",
          "multiplanar",
          "render"
        ]
      }
    },
    "required": [
      "view"
    ]
  },
  "page": "/faraday/"
}

{
  "name": "export_findings",
  "kind": "act",
  "impl": "imperative",
  "description": "Export the measurements for the regions currently found as a JSON summary the user can save. Only measurements leave the page — never voxel data. Requires the user to approve. If the user opens a different file while approval is pending, the export is cancelled.",
  "inputSchema": {
    "type": "object",
    "properties": {
      "note": {
        "type": "string",
        "description": "Optional note to attach to the export."
      }
    }
  },
  "page": "/faraday/"
}